STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYO64124.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
KYO64601.1
Hypothetical protein.
 
 
 0.921
KYO65145.1
Hypothetical protein.
 
  
 0.914
comFB
ComF operon protein 2.
  
  
 0.887
KYO64123.1
Hypothetical protein.
  
    0.854
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.850
KYO64778.1
Hypothetical protein; Belongs to the UPF0758 family.
 
    0.839
tyrA
Prephenate dehydrogenase.
   
  
 0.819
comM
Competence protein ComM.
 
  
 0.798
flgK
Flagellar hook-associated protein 1.
  
    0.782
KYO64586.1
Hypothetical protein.
   
    0.778
Your Current Organism:
Thermovenabulum gondwanense
NCBI taxonomy Id: 520767
Other names: DSM 21133, KCTC 5616, T. gondwanense, Thermovenabulum gondwanense Ogg et al. 2010 emend. Pradel et al. 2013, Thermovenabulum sp. R270, strain R270
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.