Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC53_00132 | ALC53_02576 | A0A195BZ42 | A0A195BQG3 | RNA-binding protein 39. | Uncharacterized protein. | 0.840 |
ALC53_00132 | ALC53_09604 | A0A195BZ42 | A0A151I141 | RNA-binding protein 39. | Barrier-to-autointegration factor. | 0.845 |
ALC53_00132 | ALC53_13199 | A0A195BZ42 | A0A151HYG0 | RNA-binding protein 39. | Lamin-C; Belongs to the intermediate filament family. | 0.908 |
ALC53_01252 | ALC53_13199 | A0A195BU98 | A0A151HYG0 | SUN domain-containing protein 2. | Lamin-C; Belongs to the intermediate filament family. | 0.868 |
ALC53_01994 | ALC53_02576 | A0A195BRL8 | A0A195BQG3 | Inner nuclear membrane protein Man1. | Uncharacterized protein. | 0.872 |
ALC53_01994 | ALC53_09604 | A0A195BRL8 | A0A151I141 | Inner nuclear membrane protein Man1. | Barrier-to-autointegration factor. | 0.904 |
ALC53_01994 | ALC53_13199 | A0A195BRL8 | A0A151HYG0 | Inner nuclear membrane protein Man1. | Lamin-C; Belongs to the intermediate filament family. | 0.973 |
ALC53_02576 | ALC53_00132 | A0A195BQG3 | A0A195BZ42 | Uncharacterized protein. | RNA-binding protein 39. | 0.840 |
ALC53_02576 | ALC53_01994 | A0A195BQG3 | A0A195BRL8 | Uncharacterized protein. | Inner nuclear membrane protein Man1. | 0.872 |
ALC53_02576 | ALC53_13199 | A0A195BQG3 | A0A151HYG0 | Uncharacterized protein. | Lamin-C; Belongs to the intermediate filament family. | 0.972 |
ALC53_04880 | ALC53_08738 | A0A195BK72 | A0A151I223 | Caspase-1; Belongs to the peptidase C14A family. | Myosin light chain kinase, smooth muscle. | 0.406 |
ALC53_04880 | ALC53_12850 | A0A195BK72 | A0A151HYK2 | Caspase-1; Belongs to the peptidase C14A family. | Caspase-1; Belongs to the peptidase C14A family. | 0.692 |
ALC53_04880 | ALC53_13199 | A0A195BK72 | A0A151HYG0 | Caspase-1; Belongs to the peptidase C14A family. | Lamin-C; Belongs to the intermediate filament family. | 0.911 |
ALC53_04880 | ALC53_14008 | A0A195BK72 | A0A195AU77 | Caspase-1; Belongs to the peptidase C14A family. | Caspase; Belongs to the peptidase C14A family. | 0.701 |
ALC53_05768 | ALC53_13199 | A0A151I3R0 | A0A151HYG0 | SUN domain-containing protein 1. | Lamin-C; Belongs to the intermediate filament family. | 0.868 |
ALC53_08738 | ALC53_04880 | A0A151I223 | A0A195BK72 | Myosin light chain kinase, smooth muscle. | Caspase-1; Belongs to the peptidase C14A family. | 0.406 |
ALC53_08738 | ALC53_12850 | A0A151I223 | A0A151HYK2 | Myosin light chain kinase, smooth muscle. | Caspase-1; Belongs to the peptidase C14A family. | 0.406 |
ALC53_08738 | ALC53_13199 | A0A151I223 | A0A151HYG0 | Myosin light chain kinase, smooth muscle. | Lamin-C; Belongs to the intermediate filament family. | 0.963 |
ALC53_08738 | ALC53_14008 | A0A151I223 | A0A195AU77 | Myosin light chain kinase, smooth muscle. | Caspase; Belongs to the peptidase C14A family. | 0.406 |
ALC53_09604 | ALC53_00132 | A0A151I141 | A0A195BZ42 | Barrier-to-autointegration factor. | RNA-binding protein 39. | 0.845 |
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