STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_13188Down syndrome critical region protein 3 like protein. (299 aa)    
Predicted Functional Partners:
ALC53_01069
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.950
ALC53_01920
Coiled-coil domain-containing protein 22 like protein.
   
 
 0.945
ALC53_06871
COMM domain-containing protein 4.
    
 
 0.925
ALC53_07890
Coiled-coil domain-containing protein 93.
    
 
 0.920
ALC53_07762
COMM domain-containing protein 2.
    
 
 0.837
ALC53_10772
Protein FAM45B.
    
 
 0.812
ALC53_13522
UPF0505 protein C16orf62 like protein.
   
 
 0.768
ALC53_07571
COMM domain-containing protein 10.
    
 
 0.755
ALC53_01501
COMM domain-containing protein 8.
    
 
 0.749
ALC53_06831
Exportin-7.
    
   0.634
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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