STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_08735Serine/threonine-protein kinase PRP4 like protein. (450 aa)    
Predicted Functional Partners:
ALC53_13733
Splicing factor 3B subunit 1.
   
 
 0.957
ALC53_12651
Pinin.
   
 0.942
ALC53_05614
Pre-mRNA-processing-splicing factor 8.
    
 
 0.940
ALC53_12781
Tr-type G domain-containing protein.
    
 
 0.939
ALC53_03734
Pre-mRNA-processing factor 6.
    
 
 0.935
ALC53_09805
Pre-mRNA-processing factor 6.
    
 
 0.935
ALC53_02947
U4/U6 small nuclear ribonucleoprotein Prp4.
    
 
 0.934
ALC53_06712
U4/U6 small nuclear ribonucleoprotein Prp31.
    
 
 0.933
ALC53_04689
U4/U6.U5 tri-snRNP-associated protein 1.
   
 
 0.933
ALC53_12523
Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family.
 
 
 0.930
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.