STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_08720SCO-spondin. (1277 aa)    
Predicted Functional Partners:
ALC53_02695
Beta-1,3-glucosyltransferase.
    
  0.637
ALC53_01200
GDP-fucose protein O-fucosyltransferase 2.
     
 0.635
ALC53_11276
Thrombospondin type-1 domain-containing protein 4.
     
 0.567
ALC53_06750
Papilin.
     
 0.567
ALC53_06130
Thrombospondin type-1 domain-containing protein 4.
     
 0.567
ALC53_05097
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1.
    
 0.519
ALC53_14188
Protocadherin-like wing polarity protein stan; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.493
ALC53_03190
Uncharacterized protein.
  
 
  0.433
ALC53_12123
Synaptotagmin-like protein 5.
  
 
   0.415
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.