STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_08225Putative chitinase 2; Belongs to the glycosyl hydrolase 18 family. (439 aa)    
Predicted Functional Partners:
ALC53_06688
Beta-hexosaminidase subunit beta.
    
 0.854
ALC53_04837
Beta-hexosaminidase.
    
 0.854
ALC53_03550
N-acetyl-D-glucosamine kinase.
     
 0.849
ALC53_12517
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
 0.843
ALC53_06236
Cytochrome c oxidase subunit 2.
    
 0.842
ALC53_07375
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.790
ALC53_04176
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.775
ALC53_00143
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.769
ALC53_13313
Cytochrome c oxidase subunit 6A1, mitochondrial; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.746
ALC53_02254
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.746
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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