STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_05767Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (402 aa)    
Predicted Functional Partners:
ALC53_02600
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
    
 0.998
ALC53_06002
CAAX prenyl protease 2.
    
 0.944
ALC53_03908
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.932
ALC53_09394
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
   
 0.922
ALC53_08404
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.920
ALC53_01150
Farnesyl pyrophosphate synthase.
   
 0.911
ALC53_10493
Decaprenyl-diphosphate synthase subunit 2.
   
 0.897
ALC53_08998
Nogo-B receptor.
     
 0.888
ALC53_00960
Geranylgeranyl pyrophosphate synthase.
   
 0.878
ALC53_09603
Uncharacterized protein.
     
 0.853
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.