STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_05671Cystinosin like protein. (470 aa)    
Predicted Functional Partners:
ALC53_05672
Uncharacterized protein.
   
 
  0.841
ALC53_05676
Uncharacterized protein.
   
 
  0.680
ALC53_01896
Uncharacterized protein.
   
 
  0.576
ALC53_13881
Uncharacterized protein.
   
 
  0.539
ALC53_02412
Protein sel-1 like protein 1.
   
 
  0.531
ALC53_07636
Y-box factor like protein.
      
 0.510
ALC53_13057
Uncharacterized protein.
    
 
 0.488
ALC53_13056
PQ-loop repeat-containing protein 1.
    
 
 0.488
ALC53_07070
Battenin.
   
  
 0.488
ALC53_13882
Uncharacterized protein.
   
 
  0.458
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.