STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_01885Potassium voltage-gated channel protein Shaker; Belongs to the potassium channel family. (561 aa)    
Predicted Functional Partners:
ALC53_03114
Voltage-gated potassium channel subunit beta-2.
   
 0.980
ALC53_06206
60S ribosomal protein L31.
   
 0.972
ALC53_10095
60S ribosomal protein L30.
   
 0.970
ALC53_03194
Putative 39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family.
  
 0.970
ALC53_00966
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.967
ALC53_10027
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.966
ALC53_12425
60S ribosomal protein L24.
  
 0.965
ALC53_04818
60S ribosomal protein L35.
  
 0.965
ALC53_05878
60S ribosomal protein L35a.
   
 0.963
ALC53_14096
60S ribosomal protein L32.
  
 0.963
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.