STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_13923RNA polymerase II-associated protein 1. (1204 aa)    
Predicted Functional Partners:
ALC53_04064
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
    
 
 0.946
ALC53_02857
Uncharacterized protein.
    
 
 0.751
ALC53_00069
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
    
 
 0.734
ALC53_13290
DNA-directed RNA polymerases I and III subunit RPAC1.
    
 
 0.664
ALC53_02987
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
      
 0.579
ALC53_13346
DNA-directed RNA polymerase II subunit RPB11.
    
 
 0.549
ALC53_13831
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.
      
 0.516
ALC53_06095
RNA polymerase II-associated protein 3.
      
 0.516
ALC53_01025
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 
 0.484
ALC53_07744
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.483
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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