STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_13906RNA pseudouridylate synthase domain-containing protein 2. (446 aa)    
Predicted Functional Partners:
ALC53_00324
Uncharacterized protein C7orf30.
  
 
 0.914
ALC53_11834
Pseudouridylate synthase 7 like protein.
   
 
 0.898
ALC53_03943
39S ribosomal protein L17, mitochondrial.
   
   0.897
ALC53_02856
60S ribosomal protein L13a.
  
   0.893
ALC53_06625
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.892
ALC53_03194
Putative 39S ribosomal protein L24, mitochondrial; Belongs to the universal ribosomal protein uL24 family.
   
   0.888
ALC53_11839
tRNA modification GTPase GTPBP3, mitochondrial.
  
 
 0.888
ALC53_14145
RNA methyltransferase-like protein 1.
  
 
 0.869
ALC53_00467
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.854
ALC53_00065
39S ribosomal protein L3, mitochondrial.
   
 
 0.844
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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