STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_13849Ubiquitin carboxyl-terminal hydrolase 31; Belongs to the peptidase C19 family. (1068 aa)    
Predicted Functional Partners:
ALC53_11422
Putative ATP-dependent RNA helicase DHX34.
   
 
 0.952
ALC53_03624
Polyubiquitin-A.
    
 0.789
ALC53_11648
28S ribosomal protein S9, mitochondrial.
   
 
 0.789
ALC53_02043
Polyubiquitin-A.
    
 0.789
ALC53_09607
Ubiquitin carboxyl-terminal hydrolase 10; Belongs to the peptidase C19 family.
    
0.788
ALC53_00065
39S ribosomal protein L3, mitochondrial.
   
 
 0.786
ALC53_12997
39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.784
ALC53_01586
TNF receptor-associated factor 6.
    
 0.781
ALC53_06458
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.778
ALC53_01809
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.770
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.