STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_13293Tetratricopeptide repeat protein 7B. (881 aa)    
Predicted Functional Partners:
ALC53_13917
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
    
 
 0.972
ALC53_11574
Hyccin.
    
 
 0.955
ALC53_03219
Protein EFR3 like protein cmp44E.
   
 
 0.884
ALC53_12977
Protein EFR3 like protein A.
   
 
 0.847
ALC53_10205
Phosphatidylinositide phosphatase SAC1.
    
 
 0.629
ALC53_14242
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
      
 0.530
ALC53_10665
Transmembrane emp24 domain-containing protein 5.
      
 0.527
ALC53_12613
Glycosyltransferase-like protein LARGE1.
      
 0.526
ALC53_03717
Glutaminyl-peptide cyclotransferase.
      
 0.518
ALC53_12800
Ubiquitin-fold modifier 1.
      
 0.516
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.