STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_13384Polycomb protein Scm. (765 aa)    
Predicted Functional Partners:
ALC53_03046
Polyhomeotic-like protein 2.
    
0.975
ALC53_04291
E3 ubiquitin-protein ligase RING2.
    
 0.966
ALC53_04062
Chromobox protein like protein 6.
    
 0.959
ALC53_12784
Polycomb group protein Psc.
    
 0.948
ALC53_04860
Polycomb complex protein BMI-1.
    
 0.936
ALC53_06369
Polycomb protein Sfmbt.
    
 
0.928
ALC53_12985
Alpha-2-macroglobulin-like protein 1.
    
 0.892
ALC53_11129
Uncharacterized protein.
    
 0.892
ALC53_00099
Uncharacterized protein.
    
 0.892
ALC53_04839
Histone-lysine N-methyltransferase E(Z).
   
 0.873
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.