STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_12179Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
ALC53_00733
Protein lin-52 like protein.
    
 0.686
ALC53_13734
Protein lin-54 like protein.
    
 0.684
ALC53_09664
Putative histone-binding protein Caf1.
    
 0.678
ALC53_06422
Protein lin-9 like protein.
    
 0.661
ALC53_10609
Xylosyltransferase oxt.
    
 0.656
ALC53_05267
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
    
 0.652
ALC53_11158
Retinoblastoma-like protein 1.
    
 0.626
ALC53_09204
Transcription factor E2F5.
    
 0.598
ALC53_03485
CREB-binding protein.
    
 0.563
ALC53_02371
Uncharacterized protein.
    
 0.538
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.