STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_11794BTB/POZ domain-containing protein 2. (593 aa)    
Predicted Functional Partners:
ALC53_02848
Cullin-3; Belongs to the cullin family.
   
 0.794
ALC53_13081
COP9 signalosome complex subunit 2.
   
  0.768
ALC53_03342
Cullin-1; Belongs to the cullin family.
    
 0.766
ALC53_13975
COP9 signalosome complex subunit 5.
    
  0.764
ALC53_04070
COP9 signalosome complex subunit 4.
    
  0.755
ALC53_10870
NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.724
ALC53_02172
NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.724
ALC53_05638
RING-box protein 1A.
   
 0.711
ALC53_12224
Leucine-rich repeat-containing protein 67.
    
  0.710
ALC53_08835
COP9 signalosome complex subunit 8.
    
  0.705
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.