STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_11738Nuclear receptor coactivator 6. (2250 aa)    
Predicted Functional Partners:
ALC53_08604
Bystin.
   
 0.993
ALC53_07487
Pre-rRNA-processing protein TSR1 like protein.
   
 0.989
ALC53_07181
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.987
ALC53_03486
U3 small nucleolar ribonucleoprotein IMP3.
   
 0.984
ALC53_00899
Serine/threonine-protein kinase RIO2.
   
 0.983
ALC53_11422
Putative ATP-dependent RNA helicase DHX34.
   
 0.980
ALC53_13097
Protein AATF.
   
 
 0.977
ALC53_12288
Protein LTV1 like protein.
   
 0.975
ALC53_12290
Uncharacterized protein.
   
 0.975
ALC53_00050
Putative methyltransferase WBSCR22.
   
 0.973
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.