STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_11886Zinc finger MYND domain-containing protein 11. (571 aa)    
Predicted Functional Partners:
ALC53_08141
Integrator complex subunit 1.
    
   0.895
ALC53_00812
Integrator complex subunit 3 like protein.
    
   0.895
ALC53_10279
Protein EMSY.
    
 
 0.572
ALC53_09406
Integrator complex subunit 6.
    
   0.546
ALC53_06224
Deformed epidermal autoregulatory factor 1.
   
  
 0.516
ALC53_00292
Histone-lysine N-methyltransferase SETD2.
    
 
 0.484
ALC53_10787
Transcriptional repressor p66-alpha.
    
 
 0.476
ALC53_11634
Eukaryotic translation initiation factor 4E transporter.
    
 
 0.474
ALC53_11250
PHD finger protein 20-like protein 1.
   
 
 0.459
ALC53_13658
Chromatin-remodeling complex ATPase chain Iswi.
    
 
 0.452
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.