STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_11144Pre-mRNA-processing factor 17. (563 aa)    
Predicted Functional Partners:
ALC53_02369
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
   
 0.999
ALC53_05469
Pre-mRNA-splicing factor Syf2.
    
 0.998
ALC53_09355
Coiled-coil domain-containing protein 12.
    
  0.997
ALC53_13504
Serine/arginine repetitive matrix protein 2.
   
 0.996
ALC53_03133
Pre-mRNA-splicing factor CWC25 like protein.
    
 0.996
ALC53_01907
Coiled-coil domain-containing protein 94.
    
 0.996
ALC53_10237
CWF19-like protein 2.
   
 0.995
ALC53_08823
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 0.995
ALC53_02159
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.995
ALC53_14240
Cell division cycle 5-related protein.
   
 
 0.992
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.