STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_10841Protein deadpan. (429 aa)    
Predicted Functional Partners:
ALC53_14002
E3 ubiquitin-protein ligase FANCL.
    
 0.947
ALC53_13536
Putative nuclear transport factor 2.
    
 0.864
ALC53_01053
60S ribosomal protein L10a.
    
  0.863
ALC53_04989
Achaete-scute complex protein T5.
  
 
 
 0.718
ALC53_00784
Transducin-like enhancer protein 4.
    
 0.690
ALC53_00777
Transducin-like enhancer protein 4.
    
 0.690
ALC53_00815
Protein groucho.
    
 0.690
ALC53_00813
Protein groucho.
    
 0.688
ALC53_04991
Achaete-scute complex protein T4.
  
 
 0.653
ALC53_02178
Basic helix-loop-helix neural transcription factor TAP.
    
 0.650
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.