Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC53_01067 | ALC53_01351 | A0A195BWF0 | A0A195BTT7 | Ubiquilin-1. | General transcription factor IIH subunit 1. | 0.701 |
ALC53_01067 | ALC53_01399 | A0A195BWF0 | A0A195BVS4 | Ubiquilin-1. | TFIIH basal transcription factor complex helicase XPD subunit. | 0.596 |
ALC53_01067 | ALC53_03600 | A0A195BWF0 | A0A151I548 | Ubiquilin-1. | Centrin-1. | 0.458 |
ALC53_01067 | ALC53_03693 | A0A195BWF0 | A0A195BNK1 | Ubiquilin-1. | UV excision repair protein RAD23 like protein B. | 0.967 |
ALC53_01067 | ALC53_05761 | A0A195BWF0 | A0A151I3R9 | Ubiquilin-1. | DNA excision repair protein haywire. | 0.724 |
ALC53_01067 | ALC53_06043 | A0A195BWF0 | A0A195BHJ7 | Ubiquilin-1. | Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. | 0.478 |
ALC53_01067 | ALC53_09766 | A0A195BWF0 | A0A195B6N3 | Ubiquilin-1. | DNA repair protein complementing XP-C cells like protein. | 0.920 |
ALC53_01067 | ALC53_13118 | A0A195BWF0 | A0A151HY85 | Ubiquilin-1. | General transcription factor IIH subunit. | 0.639 |
ALC53_01067 | ALC53_13168 | A0A195BWF0 | A0A151HYY1 | Ubiquilin-1. | DNA repair protein complementing XP-A cells like protein. | 0.798 |
ALC53_01067 | ALC53_13355 | A0A195BWF0 | A0A195AVR0 | Ubiquilin-1. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.665 |
ALC53_01351 | ALC53_01067 | A0A195BTT7 | A0A195BWF0 | General transcription factor IIH subunit 1. | Ubiquilin-1. | 0.701 |
ALC53_01351 | ALC53_01399 | A0A195BTT7 | A0A195BVS4 | General transcription factor IIH subunit 1. | TFIIH basal transcription factor complex helicase XPD subunit. | 0.998 |
ALC53_01351 | ALC53_03600 | A0A195BTT7 | A0A151I548 | General transcription factor IIH subunit 1. | Centrin-1. | 0.747 |
ALC53_01351 | ALC53_03693 | A0A195BTT7 | A0A195BNK1 | General transcription factor IIH subunit 1. | UV excision repair protein RAD23 like protein B. | 0.835 |
ALC53_01351 | ALC53_05761 | A0A195BTT7 | A0A151I3R9 | General transcription factor IIH subunit 1. | DNA excision repair protein haywire. | 0.999 |
ALC53_01351 | ALC53_06043 | A0A195BTT7 | A0A195BHJ7 | General transcription factor IIH subunit 1. | Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. | 0.732 |
ALC53_01351 | ALC53_09766 | A0A195BTT7 | A0A195B6N3 | General transcription factor IIH subunit 1. | DNA repair protein complementing XP-C cells like protein. | 0.987 |
ALC53_01351 | ALC53_13118 | A0A195BTT7 | A0A151HY85 | General transcription factor IIH subunit 1. | General transcription factor IIH subunit. | 0.999 |
ALC53_01351 | ALC53_13168 | A0A195BTT7 | A0A151HYY1 | General transcription factor IIH subunit 1. | DNA repair protein complementing XP-A cells like protein. | 0.986 |
ALC53_01351 | ALC53_13355 | A0A195BTT7 | A0A195AVR0 | General transcription factor IIH subunit 1. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.999 |
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