STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_09028Uncharacterized protein. (1093 aa)    
Predicted Functional Partners:
ALC53_12844
Ras-related protein Rac1.
   
 0.898
ALC53_13921
Rho-related GTP-binding protein RhoU.
   
 0.898
ALC53_11896
Ras-related protein ced-10.
   
 0.898
ALC53_09539
Cdc42 like protein.
   
 0.898
ALC53_04568
Ras-related C3 botulinum toxin substrate 1.
   
 0.898
ALC53_03110
Cdc42 like protein.
   
 0.898
ALC53_13674
Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.
    
 0.824
ALC53_03065
Ras-like GTP-binding protein Rho1.
   
 0.815
ALC53_13700
Protein diaphanous.
    
0.801
ALC53_05906
FH2 domain-containing protein 1.
    
0.778
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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