STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_09037Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (160 aa)    
Predicted Functional Partners:
ALC53_13973
ADP-ribosylation factor-related protein 1.
    
 0.857
ALC53_10391
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
  0.843
ALC53_12849
ADP-ribosylation factor-like protein 13B.
    
 0.810
ALC53_12034
Ras-related protein Rab-6A.
    
 0.771
ALC53_05865
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.760
ALC53_04677
ADP-ribosylation factor-like protein 16.
    
 0.746
ALC53_01090
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
  0.703
ALC53_00965
Ras-related protein Rab-34.
    
 0.674
ALC53_05659
TBC1 domain family member 22B.
    
   0.606
ALC53_00586
Protein RIC1 like protein.
    
  0.502
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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