STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_07708Putative prolyl-tRNA synthetase, mitochondrial. (436 aa)    
Predicted Functional Partners:
ALC53_04254
Isoleucyl-tRNA synthetase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.993
ALC53_06615
Isoleucyl-tRNA synthetase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.993
ALC53_04904
Bifunctional aminoacyl-tRNA synthetase.
  
 0.988
ALC53_05891
Tyrosine--tRNA ligase.
  
 0.985
ALC53_11647
Putative arginyl-tRNA synthetase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.973
ALC53_13540
Putative aminoacyl tRNA synthase complex-interacting multifunctional protein 2.
    
 0.971
ALC53_05123
Putative glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.964
ALC53_11860
Putative glutamyl-tRNA synthetase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.964
ALC53_01575
Arginyl-tRNA synthetase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.960
ALC53_00765
Methionyl-tRNA synthetase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.931
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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