STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_07233Peptidoglycan-recognition protein LC. (420 aa)    
Predicted Functional Partners:
ALC53_00581
Uncharacterized protein.
   
 0.917
ALC53_08852
Lysosomal thioesterase PPT2 like protein.
    
 0.682
ALC53_06203
Palmitoyl-protein thioesterase 1.
    
 0.682
ALC53_10421
Peptidoglycan-recognition protein LB.
  
  
0.642
ALC53_09703
Peptidoglycan-recognition protein; Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family.
  
  
0.633
ALC53_04902
Threonine dehydratase biosynthetic.
   
 0.625
ALC53_04901
Threonine dehydratase catabolic.
   
 0.625
ALC53_04903
Threonine dehydratase biosynthetic, chloroplastic.
   
 0.625
ALC53_13277
Phosphatidylinositol glycan anchor biosynthesis class U protein.
     
 0.609
ALC53_05758
Ceramide glucosyltransferase.
   
 0.583
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.