STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_07142Myelin transcription factor 1-like protein. (1402 aa)    
Predicted Functional Partners:
ALC53_00535
E3 ubiquitin-protein ligase HERC2.
   
   0.659
ALC53_09187
Uncharacterized protein.
     
 0.639
ALC53_04991
Achaete-scute complex protein T4.
   
  
 0.560
ALC53_11612
Neurofibromin.
      
 0.513
ALC53_02072
Gamma-1-syntrophin; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.502
ALC53_04951
Transforming protein p54/c-ets-1.
   
  
 0.495
ALC53_04212
Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.
   
    0.491
ALC53_10584
Protein LSM14 like protein B.
   
    0.434
ALC53_01259
SAM and SH3 domain-containing protein 1.
  
     0.433
ALC53_09664
Putative histone-binding protein Caf1.
    
 
 0.432
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.