STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_06268Ubiquitin carboxyl-terminal hydrolase. (349 aa)    
Predicted Functional Partners:
ALC53_10292
26S proteasome non-ATPase regulatory subunit 4.
    
 0.981
ALC53_05239
Proteasomal ubiquitin receptor ADRM1.
   
 0.978
ALC53_08988
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.976
ALC53_02997
26S proteasome non-ATPase regulatory subunit 8.
   
 0.975
ALC53_13107
Proteasome subunit beta.
   
 0.974
ALC53_12791
26S proteasome non-ATPase regulatory subunit 11.
   
 0.974
ALC53_10367
26S proteasome non-ATPase regulatory subunit 7.
   
 0.974
ALC53_12657
Nuclear factor.
    
 0.972
ALC53_12774
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.972
ALC53_12961
BRCA1-associated RING domain protein 1.
    
 0.970
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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