STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_06382Nephrin. (854 aa)    
Predicted Functional Partners:
ALC53_01305
Peripheral plasma membrane protein CASK.
    
  0.712
ALC53_01304
Peripheral plasma membrane protein CASK.
    
  0.712
ALC53_01309
Peripheral plasma membrane protein CASK.
    
  0.712
ALC53_06210
Afadin.
    
 0.692
ALC53_02760
Tyrosine-protein kinase-like 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.644
ALC53_08747
Mitochondrial import receptor subunit TOM40 like protein 1.
    
 0.625
ALC53_01889
Ig-like domain-containing protein.
  
  0.624
ALC53_07741
Disks large like protein 5.
    
 0.606
ALC53_08738
Myosin light chain kinase, smooth muscle.
    
 
0.605
ALC53_13166
Cytoplasmic protein NCK1.
    
 0.594
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.