STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_06476Vacuolar fusion protein MON1 like protein A. (524 aa)    
Predicted Functional Partners:
ALC53_02212
Vacuolar fusion protein CCZ1 like protein.
    
 0.998
ALC53_07177
Ras-related protein Rab-9A.
    
 0.984
ALC53_06602
Ras-related protein Rab-7a.
    
 0.975
ALC53_05889
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 
 0.972
ALC53_03174
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.853
ALC53_07347
Uncharacterized protein.
    
 0.819
ALC53_10570
Ras-related protein Rab-10.
    
 0.819
ALC53_09549
Uncharacterized protein.
    
 0.819
ALC53_09548
Ras-related protein Rab-8A.
    
 0.819
ALC53_06671
Ras-related protein Rab-8A.
    
 0.819
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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