Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC53_04263 | ALC53_06007 | A0A151I4R5 | A0A195BHG2 | Mitogen-activated protein-binding protein-interacting protein. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.694 |
ALC53_04263 | ALC53_06426 | A0A151I4R5 | A0A195BG28 | Mitogen-activated protein-binding protein-interacting protein. | Zinc finger protein 76. | 0.624 |
ALC53_05710 | ALC53_06007 | A0A195BHZ1 | A0A195BHG2 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.589 |
ALC53_05710 | ALC53_06426 | A0A195BHZ1 | A0A195BG28 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Zinc finger protein 76. | 0.648 |
ALC53_05710 | ALC53_13694 | A0A195BHZ1 | A0A195ATW8 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | General transcription factor 3C polypeptide 5. | 0.855 |
ALC53_06007 | ALC53_04263 | A0A195BHG2 | A0A151I4R5 | Leucine-rich repeat serine/threonine-protein kinase 1. | Mitogen-activated protein-binding protein-interacting protein. | 0.694 |
ALC53_06007 | ALC53_05710 | A0A195BHG2 | A0A195BHZ1 | Leucine-rich repeat serine/threonine-protein kinase 1. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.589 |
ALC53_06007 | ALC53_06426 | A0A195BHG2 | A0A195BG28 | Leucine-rich repeat serine/threonine-protein kinase 1. | Zinc finger protein 76. | 0.708 |
ALC53_06007 | ALC53_09650 | A0A195BHG2 | A0A151I1J7 | Leucine-rich repeat serine/threonine-protein kinase 1. | Suppressor of fused like protein. | 0.680 |
ALC53_06007 | ALC53_10484 | A0A195BHG2 | A0A195B3T0 | Leucine-rich repeat serine/threonine-protein kinase 1. | Ubiquitin-40S ribosomal protein S27a. | 0.985 |
ALC53_06007 | ALC53_11250 | A0A195BHG2 | A0A195B2T9 | Leucine-rich repeat serine/threonine-protein kinase 1. | PHD finger protein 20-like protein 1. | 0.848 |
ALC53_06007 | ALC53_14174 | A0A195BHG2 | A0A195ATC9 | Leucine-rich repeat serine/threonine-protein kinase 1. | Chromodomain-helicase-DNA-binding protein Mi-2 like protein. | 0.657 |
ALC53_06426 | ALC53_04263 | A0A195BG28 | A0A151I4R5 | Zinc finger protein 76. | Mitogen-activated protein-binding protein-interacting protein. | 0.624 |
ALC53_06426 | ALC53_05710 | A0A195BG28 | A0A195BHZ1 | Zinc finger protein 76. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.648 |
ALC53_06426 | ALC53_06007 | A0A195BG28 | A0A195BHG2 | Zinc finger protein 76. | Leucine-rich repeat serine/threonine-protein kinase 1. | 0.708 |
ALC53_06426 | ALC53_08187 | A0A195BG28 | A0A195BB51 | Zinc finger protein 76. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | 0.597 |
ALC53_06426 | ALC53_08248 | A0A195BG28 | A0A151I2N7 | Zinc finger protein 76. | 40S ribosomal protein S20. | 0.621 |
ALC53_06426 | ALC53_09650 | A0A195BG28 | A0A151I1J7 | Zinc finger protein 76. | Suppressor of fused like protein. | 0.655 |
ALC53_06426 | ALC53_10484 | A0A195BG28 | A0A195B3T0 | Zinc finger protein 76. | Ubiquitin-40S ribosomal protein S27a. | 0.618 |
ALC53_06426 | ALC53_11250 | A0A195BG28 | A0A195B2T9 | Zinc finger protein 76. | PHD finger protein 20-like protein 1. | 0.637 |
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