STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_06217SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (234 aa)    
Predicted Functional Partners:
ALC53_03258
Cytochrome c oxidase assembly protein COX15 like protein.
  
 
 0.973
ALC53_01686
Cytochrome c oxidase assembly protein COX11, mitochondrial.
  
 
 0.963
ALC53_07437
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.861
ALC53_03038
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.857
ALC53_12923
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
  
 
 0.853
ALC53_08180
Protein transport protein Sec61 subunit alpha isoform 2.
   
   0.834
ALC53_08138
Thioredoxin domain-containing protein.
  
  
 0.802
ALC53_10143
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
 
 0.796
ALC53_14076
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
    
 
 0.780
ALC53_09444
Surfeit locus protein 4 like protein.
 
    
 0.780
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.