Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALC53_01055 | ALC53_02597 | A0A195BVE9 | A0A195BS51 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | U4/U6 small nuclear ribonucleoprotein Prp3. | 0.972 |
ALC53_01055 | ALC53_04689 | A0A195BVE9 | A0A195BJT1 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | U4/U6.U5 tri-snRNP-associated protein 1. | 0.996 |
ALC53_01055 | ALC53_05614 | A0A195BVE9 | A0A151I415 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | Pre-mRNA-processing-splicing factor 8. | 0.995 |
ALC53_01055 | ALC53_05810 | A0A195BVE9 | A0A195BGJ6 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | Uncharacterized protein. | 0.997 |
ALC53_01055 | ALC53_06565 | A0A195BVE9 | A0A151HYH5 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.978 |
ALC53_01055 | ALC53_06712 | A0A195BVE9 | A0A151I376 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | U4/U6 small nuclear ribonucleoprotein Prp31. | 0.991 |
ALC53_01055 | ALC53_07100 | A0A195BVE9 | A0A195BEH1 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | Uncharacterized protein. | 0.979 |
ALC53_01055 | ALC53_10159 | A0A195BVE9 | A0A195B599 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | Splicing factor 3B subunit 3. | 0.936 |
ALC53_01055 | ALC53_12781 | A0A195BVE9 | A0A195AXX3 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | Tr-type G domain-containing protein. | 0.996 |
ALC53_01055 | ALC53_13619 | A0A195BVE9 | A0A195AUP8 | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | U5 small nuclear ribonucleoprotein 40 kDa protein. | 0.992 |
ALC53_02597 | ALC53_01055 | A0A195BS51 | A0A195BVE9 | U4/U6 small nuclear ribonucleoprotein Prp3. | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.972 |
ALC53_02597 | ALC53_04689 | A0A195BS51 | A0A195BJT1 | U4/U6 small nuclear ribonucleoprotein Prp3. | U4/U6.U5 tri-snRNP-associated protein 1. | 0.994 |
ALC53_02597 | ALC53_05614 | A0A195BS51 | A0A151I415 | U4/U6 small nuclear ribonucleoprotein Prp3. | Pre-mRNA-processing-splicing factor 8. | 0.996 |
ALC53_02597 | ALC53_05810 | A0A195BS51 | A0A195BGJ6 | U4/U6 small nuclear ribonucleoprotein Prp3. | Uncharacterized protein. | 0.995 |
ALC53_02597 | ALC53_06565 | A0A195BS51 | A0A151HYH5 | U4/U6 small nuclear ribonucleoprotein Prp3. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.981 |
ALC53_02597 | ALC53_06712 | A0A195BS51 | A0A151I376 | U4/U6 small nuclear ribonucleoprotein Prp3. | U4/U6 small nuclear ribonucleoprotein Prp31. | 0.997 |
ALC53_02597 | ALC53_07100 | A0A195BS51 | A0A195BEH1 | U4/U6 small nuclear ribonucleoprotein Prp3. | Uncharacterized protein. | 0.981 |
ALC53_02597 | ALC53_10159 | A0A195BS51 | A0A195B599 | U4/U6 small nuclear ribonucleoprotein Prp3. | Splicing factor 3B subunit 3. | 0.948 |
ALC53_02597 | ALC53_12781 | A0A195BS51 | A0A195AXX3 | U4/U6 small nuclear ribonucleoprotein Prp3. | Tr-type G domain-containing protein. | 0.988 |
ALC53_02597 | ALC53_13619 | A0A195BS51 | A0A195AUP8 | U4/U6 small nuclear ribonucleoprotein Prp3. | U5 small nuclear ribonucleoprotein 40 kDa protein. | 0.969 |
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