STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_04820Protein KRI1 like protein. (799 aa)    
Predicted Functional Partners:
ALC53_11380
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.997
ALC53_01785
Ribonucleases P/MRP protein subunit POP1.
   
  0.990
ALC53_10882
Ribonuclease P protein subunit p29.
   
  0.989
ALC53_01706
Ribonuclease P protein subunit drpp30.
   
  0.989
ALC53_07118
Ribonuclease P protein subunit p21.
   
  0.985
ALC53_10609
Xylosyltransferase oxt.
    
  0.949
ALC53_07728
Nucleolar protein 14.
   
 
 0.939
ALC53_09236
ESF1 like protein.
   
  
 0.936
ALC53_01927
Putative ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family.
   
 
 0.932
ALC53_03152
rRNA-processing protein UTP23 like protein.
   
 
 0.919
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.