STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_04595Sec1 family domain-containing protein 2; Belongs to the STXBP/unc-18/SEC1 family. (620 aa)    
Predicted Functional Partners:
ALC53_01454
Centromere/kinetochore protein zw10 like protein.
    
 
 0.941
ALC53_03353
RAD50-interacting protein 1.
   
 
 0.912
ALC53_00325
Syntaxin-18.
    
 
 0.912
ALC53_05917
Vesicle transport protein USE1.
   
   0.857
ALC53_13079
Neuroblastoma-amplified sequence.
    
 
 0.855
ALC53_04366
Gamma-soluble NSF attachment protein.
    
   0.703
ALC53_02218
Vesicle-trafficking protein SEC22b-B; Belongs to the synaptobrevin family.
   
   0.703
ALC53_09837
Protein sly1 like protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.697
ALC53_04856
Ribosomal protein S6 kinase-like 1.
    
 
 0.495
ALC53_13198
Ribosomal protein S6 kinase alpha-5.
    
 
 0.480
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.