STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_03247Meckel syndrome type 1 protein. (479 aa)    
Predicted Functional Partners:
ALC53_09911
B9 domain-containing protein 2.
    
 0.920
ALC53_03226
Coiled-coil and C2 domain-containing protein 2A.
    
 0.905
ALC53_02198
Meckelin.
     
 0.875
ALC53_05922
Uncharacterized protein.
     
 0.850
ALC53_13529
Protein FAM86A.
    
 0.817
ALC53_11509
Tumor protein 63.
     
 0.778
ALC53_09912
Tectonic-1.
    
 0.754
ALC53_13273
Uncharacterized protein C16orf68.
    
 0.736
ALC53_05370
Uncharacterized protein.
    
 
 0.690
ALC53_04980
Guanine nucleotide exchange factor for Rab-3A.
     
 0.645
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.