STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_03563Uncharacterized protein. (147 aa)    
Predicted Functional Partners:
ALC53_06007
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.708
ALC53_11250
PHD finger protein 20-like protein 1.
    
 0.637
ALC53_04263
Mitogen-activated protein-binding protein-interacting protein.
    
  0.624
ALC53_08248
40S ribosomal protein S20.
    
  0.621
ALC53_13694
General transcription factor 3C polypeptide 5.
    
 0.611
ALC53_08725
DNA ligase 4; Belongs to the ATP-dependent DNA ligase family.
    
 0.588
ALC53_04331
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
  0.586
ALC53_06458
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
  0.586
ALC53_02465
28S ribosomal protein S2, mitochondrial.
   
  0.586
ALC53_00751
Putative 28S ribosomal protein S16, mitochondrial.
   
  0.585
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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