STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_03396Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
ALC53_10473
Calcium homeostasis endoplasmic reticulum protein.
   
 0.963
ALC53_10315
AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.962
ALC53_12421
Intersectin-1.
    
  0.957
ALC53_06430
AP complex subunit beta.
    
 0.955
ALC53_06007
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.892
ALC53_14081
AP-2 complex subunit sigma.
    
 0.887
ALC53_02486
U3 small nucleolar RNA-associated protein 14 like protein A.
   
 0.885
ALC53_11144
Pre-mRNA-processing factor 17.
    
 0.878
ALC53_05469
Pre-mRNA-splicing factor Syf2.
    
 0.844
ALC53_14086
Protein RRP5 like protein.
  
 0.839
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.