STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_01926Sister chromatid cohesion protein PDS5 like protein B-A. (1198 aa)    
Predicted Functional Partners:
ALC53_04744
Double-strand-break repair protein rad21 like protein.
   
 0.998
ALC53_11446
Structural maintenance of chromosomes protein 3.
   
 0.995
ALC53_11103
Cohesin subunit SA-1.
   
 0.995
ALC53_06620
Protein wings apart-like protein.
   
 0.993
ALC53_00249
Structural maintenance of chromosomes protein.
   
 0.990
ALC53_00248
Structural maintenance of chromosomes protein 1A.
   
 0.990
ALC53_04079
Nipped-B protein.
   
 0.984
ALC53_06617
N-acetyltransferase ESCO1.
   
 0.982
ALC53_00102
Meiotic recombination protein REC8 like protein.
   
 0.974
ALC53_06636
Uncharacterized protein.
   
 0.971
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.