STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_01328Autophagy-related protein 16-1. (327 aa)    
Predicted Functional Partners:
ALC53_02236
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.993
ALC53_05565
WD repeat domain phosphoinositide-interacting protein 2.
   
 0.992
ALC53_03447
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.992
ALC53_03307
Autophagy-related protein 3.
   
 0.990
ALC53_01314
Autophagy-related protein 16-1.
 
  
  0.971
ALC53_07359
RB1-inducible coiled-coil protein 1.
   
 0.968
ALC53_13502
Serine/threonine-protein kinase ULK2.
    
 
 0.933
ALC53_12626
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
    
 
 0.927
ALC53_06776
Beclin-1-like protein.
    
 0.872
ALC53_03428
Gamma-aminobutyric acid receptor-associated protein.
    
 0.845
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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