STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_01417Transcription factor RFX3. (801 aa)    
Predicted Functional Partners:
ALC53_09377
Serine/threonine-protein kinase Chk2.
   
 0.987
ALC53_12709
Serine/threonine-protein kinase atr; Belongs to the PI3/PI4-kinase family.
    
 
 0.954
ALC53_01074
Uncharacterized protein.
     
 0.866
ALC53_03351
Forkhead box protein J1-B.
    
 
 0.740
ALC53_04046
Ankyrin repeat family A protein 2.
    
 0.733
ALC53_03642
ANK_REP_REGION domain-containing protein.
    
 0.733
ALC53_10104
Uncharacterized protein.
    
   0.712
ALC53_05110
Protein polybromo-1.
   
   0.628
ALC53_13658
Chromatin-remodeling complex ATPase chain Iswi.
    
 
 0.627
ALC53_06173
Bromodomain adjacent to zinc finger domain protein 1A.
    
 
 0.623
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.