STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC53_00275Uncharacterized protein. (121 aa)    
Predicted Functional Partners:
ALC53_08743
LIX1-like protein.
   
 0.700
ALC53_12577
Protein expanded.
    
 0.634
ALC53_03573
Neurogenic protein mastermind.
    
 0.626
ALC53_05551
Arginine-glutamic acid dipeptide repeats protein.
    
 0.626
ALC53_00623
Ras-related protein Rab-11A.
    
  0.480
ALC53_07117
Cadherin-87A.
    
  0.464
ALC53_14219
Neural-cadherin.
    
  0.464
ALC53_14217
Neural-cadherin.
    
  0.464
ALC53_14218
Neural-cadherin.
    
  0.464
ALC53_14221
Neural-cadherin; Cadherins are calcium-dependent cell adhesion proteins.
    
  0.464
Your Current Organism:
Atta colombica
NCBI taxonomy Id: 520822
Other names: A. colombica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.