STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP44864.1Glycosyl hydrolase family 25; KEGG: eci:UTI89_C2376 9.7e-11 yegX; hypothetical protein YegX K07273. (349 aa)    
Predicted Functional Partners:
EEP44863.1
Hypothetical protein.
       0.785
EEP44861.1
Carbohydrate binding domain protein; KEGG: pfl:PFL_2091 7.3e-07 chitinase K01183.
       0.738
EEP44862.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.737
EEP44860.1
Hypothetical protein; KEGG: shm:Shewmr7_0556 1.5e-05 RNA-directed DNA polymerase K00986; Psort location: Cytoplasmic, score: 8.87.
       0.685
EEP44681.1
Glycosyl hydrolase family 25; KEGG: spd:SPD_1403 2.0e-18 lytC; 1,4-beta-N-acetylmuramidase, putative K01227.
 
     0.657
EEP44857.1
Hypothetical protein; KEGG: eci:UTI89_C0735 4.9e-07 tolA; membrane spanning protein TolA K03646.
    
 0.448
EEP44850.1
Prophage LambdaSa1, structural protein; Psort location: Cytoplasmic, score: 8.87.
    
 0.423
EEP44865.1
E1-E2 ATPase; KEGG: lsl:LSL_1210 5.1e-144 cation-transporting ATPase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.413
Your Current Organism:
Collinsella intestinalis
NCBI taxonomy Id: 521003
Other names: C. intestinalis DSM 13280, Collinsella intestinalis DSM 13280, Collinsella intestinalis RCA56-68, Collinsella intestinalis str. DSM 13280, Collinsella intestinalis strain DSM 13280
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.