Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEP44113.1 | EEP44114.1 | COLINT_03072 | COLINT_03071 | DHHA2 domain protein; KEGG: rxy:Rxyl_0826 5.9e-49 inorganic diphosphatase K01507; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein. | 0.572 |
EEP44113.1 | EEP44115.1 | COLINT_03072 | COLINT_03073 | DHHA2 domain protein; KEGG: rxy:Rxyl_0826 5.9e-49 inorganic diphosphatase K01507; Psort location: Cytoplasmic, score: 8.87. | Histidinol phosphate phosphatase HisJ family; KEGG: oih:OB0554 1.4e-40 histidinol phosphatase K04486; Psort location: Cytoplasmic, score: 8.87; Belongs to the PHP hydrolase family. HisK subfamily. | 0.553 |
EEP44114.1 | EEP44113.1 | COLINT_03071 | COLINT_03072 | Hypothetical protein. | DHHA2 domain protein; KEGG: rxy:Rxyl_0826 5.9e-49 inorganic diphosphatase K01507; Psort location: Cytoplasmic, score: 8.87. | 0.572 |
EEP44114.1 | EEP44115.1 | COLINT_03071 | COLINT_03073 | Hypothetical protein. | Histidinol phosphate phosphatase HisJ family; KEGG: oih:OB0554 1.4e-40 histidinol phosphatase K04486; Psort location: Cytoplasmic, score: 8.87; Belongs to the PHP hydrolase family. HisK subfamily. | 0.741 |
EEP44115.1 | EEP44113.1 | COLINT_03073 | COLINT_03072 | Histidinol phosphate phosphatase HisJ family; KEGG: oih:OB0554 1.4e-40 histidinol phosphatase K04486; Psort location: Cytoplasmic, score: 8.87; Belongs to the PHP hydrolase family. HisK subfamily. | DHHA2 domain protein; KEGG: rxy:Rxyl_0826 5.9e-49 inorganic diphosphatase K01507; Psort location: Cytoplasmic, score: 8.87. | 0.553 |
EEP44115.1 | EEP44114.1 | COLINT_03073 | COLINT_03071 | Histidinol phosphate phosphatase HisJ family; KEGG: oih:OB0554 1.4e-40 histidinol phosphatase K04486; Psort location: Cytoplasmic, score: 8.87; Belongs to the PHP hydrolase family. HisK subfamily. | Hypothetical protein. | 0.741 |