STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEP43741.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (67 aa)    
Predicted Functional Partners:
EEP43742.1
Peptidase C26; KEGG: fnu:FN0218 3.2e-32 anthranilate synthase component II K01656; Psort location: Cytoplasmic, score: 8.87.
       0.594
EEP43743.1
KEGG: blo:BL0021 1.8e-93 gluA; ATP-binding protein of ABC transporter for glutamate K02028; Psort location: CytoplasmicMembrane, score: 9.49.
       0.594
EEP43744.1
ABC transporter, permease protein; KEGG: bja:blr4464 2.2e-22 probable ABC transporter ATP-binding/permease protein K02028:K02029; Psort location: CytoplasmicMembrane, score: 10.00.
       0.434
EEP43745.1
KEGG: sma:SAV6546 1.2e-14 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 10.00.
       0.434
Your Current Organism:
Collinsella intestinalis
NCBI taxonomy Id: 521003
Other names: C. intestinalis DSM 13280, Collinsella intestinalis DSM 13280, Collinsella intestinalis RCA56-68, Collinsella intestinalis str. DSM 13280, Collinsella intestinalis strain DSM 13280
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.