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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mpal_1237PFAM: transcriptional regulator PadR family protein; KEGG: rru:Rru_A3441 PadR family transcriptional regulator. (226 aa)    
Predicted Functional Partners:
Mpal_0987
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mem:Memar_0659 ABC transporter-related protein.
  
  
 0.608
Mpal_1127
KEGG: mhu:Mhun_0222 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.608
Mpal_1257
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mbn:Mboo_0614 daunorubicin resistance ABC transporter ATPase subunit.
  
  
 0.608
Mpal_1460
KEGG: mbn:Mboo_1019 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.608
Mpal_1503
KEGG: amt:Amet_3905 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.608
Mpal_2562
KEGG: mhu:Mhun_1529 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.608
Mpal_1477
PFAM: isochorismatase hydrolase; KEGG: ckl:CKL_2496 PhzA.
 
     0.405
Your Current Organism:
Methanosphaerula palustris
NCBI taxonomy Id: 521011
Other names: Candidatus Methanosphaerula palustris E1-9c, M. palustris E1-9c, Methanosphaerula palustris E1-9c, Methanosphaerula palustris str. E1-9c, Methanosphaerula palustris strain E1-9c
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