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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpal_1663KEGG: mbn:Mboo_1484 circadian clock protein KaiC; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase. (574 aa)    
Predicted Functional Partners:
Mpal_1662
PFAM: KaiB domain protein; KEGG: mma:MM_1091 thiol-disulfide isomerase.
 
     0.938
Mpal_1661
PFAM: KaiB domain protein; KEGG: mbn:Mboo_1486 KaiB domain-containing protein.
 
     0.928
Mpal_1660
KEGG: mac:MA1270 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
     
 0.669
Mpal_1664
PFAM: extracellular solute-binding protein family 3; KEGG: mhu:Mhun_0032 extracellular solute-binding protein.
       0.463
Your Current Organism:
Methanosphaerula palustris
NCBI taxonomy Id: 521011
Other names: Candidatus Methanosphaerula palustris E1-9c, M. palustris E1-9c, Methanosphaerula palustris E1-9c, Methanosphaerula palustris str. E1-9c, Methanosphaerula palustris strain E1-9c
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