Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mpal_2002KEGG: npu:Npun_F6362 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein. (761 aa)    
Predicted Functional Partners:
Mpal_1519
PFAM: response regulator receiver; KEGG: mag:amb2979 FOG: CheY-like receiver.
 
 
 
 0.794
Mpal_2268
PFAM: response regulator receiver; KEGG: mag:amb2979 FOG: CheY-like receiver.
 
 
 
 0.786
Mpal_2460
KEGG: cli:Clim_1600 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
     0.730
Mpal_1767
PFAM: MCP methyltransferase CheR-type; KEGG: mbn:Mboo_1581 protein-glutamate O-methyltransferase.
   
 0.649
Mpal_2247
PFAM: response regulator receiver; KEGG: ter:Tery_4223 response regulator receiver protein.
 
 
 
 0.595
Mpal_2157
PFAM: response regulator receiver; KEGG: mbn:Mboo_1937 response regulator receiver protein.
 
 
 0.574
Mpal_2156
PFAM: response regulator receiver; KEGG: mbn:Mboo_1937 response regulator receiver protein.
 
 
 0.561
Mpal_2266
Putative PAS/PAC sensor protein; KEGG: mbn:Mboo_0292 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 
 0.485
Mpal_2462
KEGG: mbn:Mboo_1502 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
   
 0.443
Mpal_1514
KEGG: mhu:Mhun_1353 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 
 0.425
Your Current Organism:
Methanosphaerula palustris
NCBI taxonomy Id: 521011
Other names: Candidatus Methanosphaerula palustris E1-9c, M. palustris E1-9c, Methanosphaerula palustris E1-9c, Methanosphaerula palustris str. E1-9c, Methanosphaerula palustris strain E1-9c
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