STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpal_2342Hypothetical protein; KEGG: mem:Memar_2194 beta-lactamase domain-containing protein. (52 aa)    
Predicted Functional Partners:
Mpal_2341
PFAM: Radical SAM domain protein; KEGG: mla:Mlab_0336 hypothetical protein.
       0.786
Mpal_2343
PFAM: transposase IS4 family protein; KEGG: mbu:Mbur_0446 transposase, IS4.
       0.504
Mpal_2338
PFAM: inositol monophosphatase; KEGG: mem:Memar_0967 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase.
       0.416
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.414
Your Current Organism:
Methanosphaerula palustris
NCBI taxonomy Id: 521011
Other names: Candidatus Methanosphaerula palustris E1-9c, M. palustris E1-9c, Methanosphaerula palustris E1-9c, Methanosphaerula palustris str. E1-9c, Methanosphaerula palustris strain E1-9c
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.