STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF30219.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
SDF30155.1
Hypothetical protein.
 
     0.778
SDF30188.1
Aa3 type cytochrome c oxidase subunit IV.
       0.773
SDF29476.1
Hypothetical protein.
  
     0.772
SDE85668.1
Hypothetical protein.
  
     0.768
SDE06285.1
Hypothetical protein.
  
     0.767
SDE50646.1
Phasin protein.
  
     0.763
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.753
SDE06172.1
Invasion protein IalB, involved in pathogenesis.
  
     0.751
SDE82669.1
SseB protein N-terminal domain-containing protein.
  
     0.751
SDE43166.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
  
     0.735
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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