STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF31919.1Hypothetical protein; Manually curated. (180 aa)    
Predicted Functional Partners:
SDE59227.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.869
SDE14357.1
Cysteine-rich secretory protein family protein.
  
 0.728
SDF12182.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
    
 0.699
SDE62604.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
   0.636
SDE06129.1
Acyl carrier protein.
   
   0.593
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.593
SDE93309.1
Hypothetical protein.
   
 0.548
SDE19358.1
Phage conserved hypothetical protein, phiE125 gp8 family.
   
 0.545
SDF46149.1
Heparinase II/III-like protein.
    
  0.491
SDE03047.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
    
 0.483
Your Current Organism:
Limimaricola pyoseonensis
NCBI taxonomy Id: 521013
Other names: DSM 21424, KCTC 22372, L. pyoseonensis, Loktanella pyoseonensis, Loktanella pyoseonensis Moon et al. 2010, strain JJM85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.